kdetrees (0.1.5)

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Nonparametric method for identifying discordant phylogenetic trees.


A non-parametric method for identifying potential outlying observations in a collection of phylogenetic trees based on the methods of Owen and Provan (2011). Such discordant trees may indicate problems with sequence annotation or tree reconstruction, or they may represent interesting biological phenomena, such as horizontal gene transfers.

Maintainer: Grady Weyenberg
Author(s): Grady Weyenberg and Ruriko Yoshida

License: GPL-2

Uses: ape, distory, ggplot2

Released almost 6 years ago.

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Related packages: PHYLOGR, apTreeshape, geiger, ggplot2, ouch, paleoTS, rmetasim, vegan, ape, phangorn, picante, MCMCglmm, metafor, pegas, phylobase, adephylo, phyloclim, BoSSA, phyclust, TreeSim(20 best matches, based on common tags.)

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